SE3950016

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3914
  • Vitis vinifera
  • SE3950016
  • PIF/harbinger
  • To3
  • chr11:14752645-14752769
  • TTA
  • AGAGTGCGTTTGGTAATAATTCTAGAAAATGTTTCTAGTCTTTCTAACATTTGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT     G         ATA   C   A  A         TC   C           TGATA
  AGAGT CGTTTGGTA   ATT TAG AA TGTTTCTAG  TTT TAACATTTGAA     
  ||||| |||||||||   ||| ||| || |||||||||  ||| |||||||||||     T
  TCTCG GCAAACCGT   TAA ATC TT ACAAAGATT  AAA ATTGTGAATTT     
AT     G         CAC   A   C  C         GT   A           TTAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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