SE3950056

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3954
  • Vitis vinifera
  • SE3950056
  • PIF/harbinger
  • To3
  • chrUn:31219452-31219574
  • TTA
  • AGAGTGTATTTGGTAGTGATTTTAGAAAGTATTTATAAGATTTATAATACTTGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT       A            TT        A   A    A               AATTT
  AGAGTGT TTTGGTAGTGAT  TAGAAAGT TTT TAAG TTTATAATACTTGAA     
  ||||||| ||||||||||||  |||||||| ||| |||| |||||||||||||||     T
  TCTCACA AAATTGTCACTA  ATCTTTTA AAA ATTC AAATATTATGAACTT     
AT       C            --        C   A    G               CCTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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