SE3950061

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3959
  • Vitis vinifera
  • SE3950061
  • PIF/harbinger
  • To10
  • chr12:10055596-10055721
  • TTA
  • AGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT   ATCCA                      TCTTCTAACC             --AA       AT
  AGA     TTTGATAGTAATTCTAGGAAGC          TTTCTAGCACTTG    AATTCTT  
  |||     ||||||||||||||||||||||          |||||||||||||    |||||||  C
  TCT     AAGTTATCATTAAGATTCTTCG          AAAGATCGTGAAC    TTAAGAA  
AT   CGAAC                      ---------T             GTCA       AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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