SE2250104

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4827
  • Zea mays
  • SE2250104
  • PIF/harbinger
  • To46
  • chr4:176882738-176882873
  • TTA
  • AGGGCTAGTTTGGGAGTCTCAAAACCGGAGAGGATTGGAGGGGCTAGAATCTCCTTCTTATTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                  T           A               G A               AT
  AGGGCTAGTTTGGGAGTC CAAAACCGGAG GGATTGGAGGGGCTA A TCTCCTTCTTATTCA  
  |||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||   
  TCCCGATCAAACCCTCGG GTTTTGGCCTC CCTAACCTCCCTGAT T AGGGGAAGAATAAGT  
AT                  T           C               G C               TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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