SE2210110

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4833
  • Zea mays
  • SE2210110
  • Tc1/Mariner
  • St8
  • chr5:13590789-13590952
  • TA
  • TACTCCCTCCGTCCCAAAATAGTAGTCATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                  A   TAG  A    --------------AGATC       TTATGTCTGTATTCAAATGGATGAAGATGAA
TACTCCCTCCGTCCCAAA TAG   TC TTTT                   TTAGTTT                               
|||||||||||||||||| |||   || ||||                   |||||||                                
ATGAGGGAGGCAGGGTTT ATT   AG AAAA                   TGTTATG                               
                  A   TTA  C    CCAATTAATTACCCAAGCA       AATTACATATACGAAATATATACACAGATCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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