SE2250115

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4838
  • Zea mays
  • SE2250115
  • PIF/harbinger
  • To46
  • chr5:23827928-23828063
  • TAA
  • AGGGCTAGTTTGGGAGCCACAAAACCGGAGGAAATTGGAGGGACTAAAATCCTCTCCTTATTTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                -   C  A        AA         A            C T      AA
  AGGGCTAGTTTGGGAG CCA AA ACCGGAGG  ATTGGAGGG CTAAAATCCTCT C TATTTA  
  |||||||||||||||| ||| || ||||||||  ||||||||| |||||||||||| | ||||||   
  TCCCGATCAAACCCTC GGT TT TGGCCTCC  TAACCTCCC GATTTTAGGGGA G ATAAGT  
AA                A   -  A        CC         C            A T      TG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3