SE2250142

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4865
  • Zea mays
  • SE2250142
  • PIF/harbinger
  • To55
  • chr5:135393470-135393602
  • TAA
  • AGTGCCCATTCG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA  T  CCA    GTGAGCTA   T A   C  ---A   CTA      G  ----ATC       ATA
  AG GC   TTCG        GGA T GGA CT    GAA   TTCCAT TG       AGTTTTA   
  || ||   ||||        ||| | ||| ||    |||   |||||| ||       |||||||   T
  TC CG   AAGC        CCT A CCT GA    CTT   AAGGTG AC       TCAAAAT   
AA  C  AAC    AAAACAAG   T -   A  AAAC   AAC      G  CTTACAA       AAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3