SE2250146

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4869
  • Zea mays
  • SE2250146
  • PIF/harbinger
  • To56
  • chr6:155447230-155447374
  • TTA
  • TAGGGCTTGTTTGGGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
T        -         ATCTCAGAT     T    G      GTA  T            T T   A    CTAAT
 TAGGGCTT GTTTGGGTA         TAGAG GGAT GAGGTG   TG GGTGTATTGAAG G AAT TGAA     
 |||||||| |||||||||         ||||| |||| ||||||   || |||||||||||| | ||| ||||     T
 ATTCCGAA CAAACCCAT         ATCTC CCTA CTTCAC   AC CCACATAGCTTC C TTA ACTT     
         A         ---------     -    A      ATA  T            - C   -    TCTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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