SE2220148

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4871
  • Zea mays
  • SE2220148
  • Mutator
  • M15
  • chr6:88036040-88036191
  • TAATAAATA
  • TGATTAATTATATGTGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
    TAATAAATA      ATT      G  --ACACAACTTTTAC   AT    T                      A
             TGATTA   ATATGT GC               AAA  TAGA GATTAGTTCGTTTTAATGCTAT 
             ||||||   |||||| ||               |||  |||| |||||||||||||||||||||| A
             ATTAAT   TATACA TG               TTT  ATCT TTGATTAAGTAAAATTACGGTG 
ATAAATAATCTCA      CTT      G  AATTTAAAACTTTTC   CT    -                      A
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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