SE2250154

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4877
  • Zea mays
  • SE2250154
  • PIF/harbinger
  • To44
  • chr4:155676536-155676671
  • TAA
  • AGGGCTGATTTGGTGCTAAGGGATCCCAAGGGGATCCATGGGGGAGGAATCCCCTTGTTATTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               C                                    C     T     AA
  AGGGCTGATTTGGTG TAAGGGATCCCAAGGGGATCCATGGGGGAGGAATCC CTTGT ATTCA  
  ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||   
  TCCCGACTAAACCAC ATTCCCTAGGGTTCCCCTAGGTACCCCCTCTTTAGG GAACG TAAGT  
AA               C                                    A     T     TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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