SE2250161

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4884
  • Zea mays
  • SE2250161
  • PIF/harbinger
  • To4
  • chr7:154732932-154733054
  • TTA
  • AGGGCTAGTTTGGGAACCCTAATTTTCTATGGGATTTCTATTTTTTTAAGGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                     A               C                 ATGA
  AGGGCTAGTTTGGGAACCCTA TTTTCTATGGGATTT TATTTTTTTAAGGGAAA    
  ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    A
  TCCCGATCAAACCCTTGGGGT AAAGGGTGCCCTAAA GTAAAAGGGTTCTCTTT    
AT                     A               A                 AATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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