SE2250170

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4893
  • Zea mays
  • SE2250170
  • PIF/harbinger
  • To61
  • chr6:149693761-149693894
  • TAA
  • AGGGCTTGTTCGGTTACACCAATCCAGAGGGGGATTGGAGGGGTTTAAATCTCCGCTGAGTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA     T                                  G  T          G  G     TT
  AGGGC TGTTCGGTTACACCAATCCAGAGGGGGATTGGAG GG TTAAATCTCC CT AGTCA  
  ||||| |||||||||||||||||||||||||||||||||| || |||||||||| || |||||   
  TCCCG ACAAGCCAATGTGGTTAGGTCTCTCCCTAACCTC CC AATTTAGGGG GG TCAGT  
AA     T                                  A  T          A  A     TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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