SE2250179

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4902
  • Zea mays
  • SE2250179
  • PIF/harbinger
  • To4
  • chr6:136268170-136268292
  • TAA
  • AGGGCTAGTTTGGGAATCCCGTTTTTCCAAGGGATTTCTATTTTCCCAAGGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                 CC                                    TTAG
  AGGGCTAGTTTGGGAAT  CGTTTTTCCAAGGGATTTCTATTTTCCCAAGGGAAA    
  |||||||||||||||||  ||||||||||||||||||||||||||||||||||||    T
  TCCCGATCAAACCCTTG  GTAAAAGGGTTCCCTAAAGATAAAAGGGTTCCCTTT    
AA                 AT                                    TACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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