SE2250181

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4904
  • Zea mays
  • SE2250181
  • PIF/harbinger
  • To4
  • chr6:165704448-165704570
  • TTA
  • AGGGCTAGTTTGGGAACCTCAATTTCCCATGAGATTTCTATTTTCTTATGGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                   C         T A                T      ATGA
  AGGGCTAGTTTGGGAACCT AATTTCCCA G GATTTCTATTTTCTTA GGGAAA    
  ||||||||||||||||||| ||||||||| | |||||||||||||||| ||||||    A
  TCCCGATCAAACCCTTGGG TTAAAGGGT C CTAAAGATAAAAGGGT CCCTTT    
AT                   A         T C                T      AATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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