SE2250183

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4906
  • Zea mays
  • SE2250183
  • PIF/harbinger
  • To66
  • chr5:182598609-182598740
  • TCA
  • AGGGCCCGTTCGGTTGATAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TC            -G  GA    GAATAGAA      AACTGTTCCGGTCCGGATTGCTTCTCTAA
  AGGGCCCGTTCG  TT  TAGG        GACCGG                             
  ||||||||||||  ||  ||||        ||||||                              
  TCCCGGGCAAGC  AG  ATCC        GTTCTT                             
AC            AA  AC    -TAATGTG      AATAAGGACAACTAGTTTTGAATATGTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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