SE2210184

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4907
  • Zea mays
  • SE2210184
  • Tc1/Mariner
  • St8
  • chr4:29210312-29210475
  • TA
  • TACTCCCTCCGTCCCAAAATAGCATTTGTTTTA

Secondary structure and sequence

TSD    TIR
5'



3' 
         C        A   C          -------------AC  T    TTTTATAACTATATTCAAATAAATGATGAAGAAT
TACTCCCTC GTCCCAAA TAG ATTTGTTTTA               TC GGAT                                  
||||||||| |||||||| ||| ||||||||||               || ||||                                   
ATGAGGGAG CAGGGTTT ATT TAAGCAAAAT               GT ATGT                                  
         A        A   T          CCATTAATTACTTAA  -    TATGAACTACATACGCAAAATATCTACACAGTTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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