SE2250188

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4911
  • Zea mays
  • SE2250188
  • PIF/harbinger
  • To67
  • chr7:52584180-52584312
  • TTA
  • AGGGGGTGTTTGTTTGAGATTATAATCTATTCAGATTATATAATCTAACAACTTTTGAACTAAGAGTTAGTTCAAAAATTGTTGGATTATATAATCTAGGTGGATTATAATCCCAAACAAACACCCCCT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                A              C                   C           G
  AGGGGGTGTTTGTTTG GATTATAATCTATT AGATTATATAATCTAACAA TTTTGAACTAA 
  |||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||| A
  TCCCCCACAAACAAAC CTAATATTAGGTGG TCTAATATATTAGGTTGTT AAAACTTGATT 
AT                C              A                   A           G
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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