SE2230199

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4922
  • Zea mays
  • SE2230199
  • hAT
  • Hat36
  • chr7:171528144-171528545
  • TATAGAAC
  • CAGGGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
TATAGAAC     G      GGCAAATTTATAGGCCCTGTACTAAATTTCAAAAGAGGCCCTATTTTATTAAAAAAAATGTAATCGAAATTATATTGTAATAGAATTCATGTATTCTAAATTACAAAAGGTTTACTAGATAACTCTTATAACTATTTATATTAAATCTATCCGTTTTTACGAAATTATATTATAATAGAGT
        CAGGG CGGGCC                                                                                                                                                                                     
        ||||| ||||||                                                                                                                                                                                      
        GTCCC GCCCGG                                                                                                                                                                                     
CAAGATAT     G      GGTCCGTGCACGCCGTTCACGCTGGCATGCCCCGGGTTTTAAGACTCCCCGGATTTTTTTAAGAATAGAGTTATTATACATAGTTATTTGTCTGATTGTAATATAGTAGATTCAACTTGAGTCAATTGTCGATCTGACAACGAGAAGTTTATATAGATAATTATGCATACAAATAAATATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3