Plant MITE

SE2210294

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_5017
Zea mays
SE2210294
Tc1/Mariner
St1
chr8:25016451-25016534
TA
TACTACCTCCGTTCTTGAATATTTGTCAC

Secondary structure and sequence

TSD TIR

5'

3'

    A           GAA        A CCGC     CATT
TACT CCTCCGTTCTT   TATTTGTC C    TAGTT    
|||| |||||||||||   |||||||| |    |||||     
ATGA GGAGGCAAGAA   ATAAACAG G    ATCAA    
    G           AAA        C TAAA     ATTT

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2210294

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2210294