SE2250321

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5044
  • Zea mays
  • SE2250321
  • PIF/harbinger
  • To58
  • chr10:130031117-130031240
  • TAA
  • AGGGCTACTTTGGGAACCTCAAATCCCTTTCGGGATTGGAGGGGATTGAGGTTGAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA       C         C           T                  A  TT     GAA
  AGGGCTA TTTGGGAAC TCAAATCCCTT CGGGATTGGAGGGGATTG GG  GAAAT   
  ||||||| ||||||||| ||||||||||| |||||||||||||||||| ||  |||||    
  TCCCGAT AAACCTTTG AGTTTAGGGAA GCCCTAACTTCCCCTAAC TC  CTTTA   
AA       C         -           -                  C  TC     ATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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