SE2250343

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5066
  • Zea mays
  • SE2250343
  • PIF/harbinger
  • To4
  • chr10:149813195-149813317
  • TTA
  • AGGGCTAGTTTGGGATCCCCATTTTCCCAAGGGTTTTTCATTTTCCCAAGGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT             G               A   T      T              TTAG
  AGGGCTAGTTTGG ATCCCCATTTTCCCA GGG TTTTCA TTTCCCAAGGGAAA    
  ||||||||||||| ||||||||||||||| ||| |||||| ||||||||||||||    T
  TCCCGATCAAACC TGGGGGTAAAAGGGT CCC AAAGGT AAAGGGTTCTCTTT    
AT             G               A   T      T              TACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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