SE2250359

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5082
  • Zea mays
  • SE2250359
  • PIF/harbinger
  • To4
  • chr10:109952268-109952390
  • TTA
  • AGGGCTAGTTTGGGAACACTAATTTCCCATGGGATTTTCATTTTCCCAAGGCAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                           C                   AA  C   TTAG
  AGGGCTAGTTTGGGAACACTAATTTCC ATGGGATTTTCATTTTCCC  GG AAA    
  ||||||||||||||||||||||||||| |||||||||||||||||||  || |||    T
  TCCCGATCAAACCCTTGTGATTAAAGG TACCCTAAAAGTAAAAGGG  CC TTT    
AT                           A                   AA  C   TACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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