SE2220364

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5087
  • Zea mays
  • SE2220364
  • Mutator
  • M13
  • chr10:7865990-7866162
  • GCCATCTGC
  • GC

Secondary structure and sequence

TSD    TIR
5'



3' 
  CATCT     CC   G  AA          A   TT GTG    TC   A  ----          --   CACAAATCATAGACACAG
GC     GCGAG  ATT GC  TTTTGCCATT TCA  T   GGCT  GCC GT    ATGCCATCGG  ACC                  
||     |||||  ||| ||  |||||||||| |||  |   ||||  ||| ||    ||||||||||  |||                   
CG     CGCTC  TAA CG  AAAACGGTGA AGT  A   CCGA  CGG CA    TACGGTAGGG  CAG                  
  TCTAC     TT   A  AC          G   TT -AA    --   A  ATAA          CA   ATACTGACCACCCTGGCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3