SE2250387

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5110
  • Zea mays
  • SE2250387
  • PIF/harbinger
  • To44
  • chr8:25444309-25444434
  • TCA
  • AGGGCTGATTTGGTGACCCGGGATCCCGAGGGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TC                CCC        G      AGAA   CTCTTGCTATTCAAAATTGAAT
  AGGGCTGATTTGGTGA   GGGATCCC AGGGGA    ATC                      
  ||||||||||||||||   |||||||| ||||||    |||                       
  TCCCGACTAAACCACT   CCCTAGGG TCCCCT    AGG                      
AC                AAT        A      ----   TACCCCCTCCTTAGGGGAACGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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