SE2250412

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5135
  • Zea mays
  • SE2250412
  • PIF/harbinger
  • To4
  • chr8:128915455-128915577
  • TTA
  • AGGGCTAGTTTGGGAACCTCAATTTCCCAAGGGATTTCTATTTTTTCAAGGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                  TC       C                    A      TTAG
  AGGGCTAGTTTGGGAACC  AATTTCC AAGGGATTTCTATTTTTTCA GGGAAA    
  ||||||||||||||||||  ||||||| |||||||||||||||||||| ||||||    T
  TCCCGATCAAACCCTTGG  TTAAAGG TTCCCTAAAGATAAAAGGGT CTCTTT    
AT                  TA       A                    A      TATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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