SE2250443

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5166
  • Zea mays
  • SE2250443
  • PIF/harbinger
  • To35
  • chr9:48114628-48114761
  • TGA
  • AGGGCATGTTCGGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TG     A         TCACCCAAACCG     -   CG  -                    T   AT
  AGGGC TGTTCGGTT            GAGGG GAT  AG GGGGATTGAATCCCTTTCTA TCA  
  ||||| |||||||||            ||||| |||  || |||||||||||||||||||| |||   
  TCCCG ACAAGCCAA            CTCCC CTA  TC CCCCTAATTTAGGGAAGGAT AGT  
AG     A         -TCTTCACCTAA     T   -A  T                    C   TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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