SE2220474

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5197
  • Zea mays
  • SE2220474
  • Mutator
  • M10
  • chr9:27982707-27982879
  • ATAATTTAA
  • GGAACAATTGGATCTATACCATTAAAAGATCCAAACTTTAGATATATACCATGGAC

Secondary structure and sequence

TSD    TIR
5'



3' 
 ATAATTTAA    CAA                        CAA     A   A        GG  CCCAC  G     GACT      GA
          GGAA   TTGGATCTATACCATTAAAAGATC   ACTTT GAT TATACCAT  AC     AT TCATT    CATGTG  
          ||||   ||||||||||||||||||||||||   ||||| ||| ||||||||  ||     || |||||    ||||||   
          CCTT   AACCTAGGTATGGTAATTTTCTAG   TGAAA CTA GTATGGTA  TG     TA AGTGA    GTACAC  
AATTTAATAC    -TA                        TAG     C   G        -A  ----A  G     --AT      CC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3