SE2020018

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5220
  • Medicago truncatula
  • SE2020018
  • Mutator
  • M2
  • MtChr4:6978627-6978827
  • TTTTCATCG
  • GAGCAATGATATTTGTACATCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
 TTTTCATC   C               TC  TTTCATT        A   A    C  G      -- -   - -   TATTGGTCAAAAACAATGGAGAGAG
         GAG AATGATATTTGTACA  CA       ACAACTTT GTG CAAC TT TTTTTC  T CTT T TTT                         
         ||| |||||||||||||||  ||       |||||||| ||| |||| || ||||||  | ||| | |||                          
         CTC TTACTATAAACATGT  GT       TGTTGAAA CAT GTTG AA AGAGAG  T AAT T CTA                         
CTCCTTTTA   T               TA  TAAACAC        A   -    A  G      TA G   G A   CCAGAATAGAAGATTGAAGTAAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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