SE2030022

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5224
  • Medicago truncatula
  • SE2030022
  • hAT
  • Hat3
  • MtChr4:522414-522591
  • TTCAATAC
  • TGAAGCATGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCAATACCTA    GC     TACGA          --   ATA  -------- CACTAACACTGATACATCGACACCGTTAATAATTTAAAAAAAAAT
           TGAA  ATGAA     ACATGGACAC  CGG   CG        A                                             
           ||||  |||||     ||||||||||  |||   ||        |                                             A
           ACTT  TACTT     TGTGCCTGTG  AAG   TC        A                                             
       CATA    GA     -----          AG   ---  TAATCCGC CAGGGCCGTTAAGCTGTGGCTCTGTAATAATATGACTTAATACCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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