SE2010031

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5233
  • Medicago truncatula
  • SE2010031
  • Tc1/Mariner
  • St4
  • MtChr1:6415959-6416107
  • TA
  • TACATCCTCCGGTTACTAATATAAGCAAAATTTATATTTTAGGTTCATTTATTTAATAATGTATGTGGTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
           G      A           -                           A             ATA
TACATCCTCCG TTACTA TATAAGCAAAA TTTATATTTTAGGTTCATTTATTTAAT ATGTATGTGGTCT   
||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||   A
ATGTGGGAGGT AGTGAT ATATTCGTTTT AAATGTAGAATCTAAGTAAGTAAATTA TACGTGTACTAGA   
           -      A           T                           C             AAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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