Plant MITE

SE2010051

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_5253
Medicago truncatula
SE2010051
Tc1/Mariner
St8
MtChr3:25275664-25275755
N.A.
ATTGGTCAAAGAAAATTGATGT

Secondary structure and sequence

TSD TIR

5'

3'

ATATAAGCAAA      ----------    G   A       ATTTCCTC   C
           ATTGGT          CAAA AAA TTGATGT        CAA 
           ||||||          |||| ||| |||||||        ||| A
           TAGCCA          GTTT TTT AACTACA        GTT 
         AA      TTTTCACTCC    G   C       GAAACAAA   T

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2010051

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2010051