SE2050054

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5256
  • Medicago truncatula
  • SE2050054
  • PIF/harbinger
  • To6
  • MtChr5:27329658-27330013
  • TAA
  • TAAGACCATCCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
      -  TC   AACA        GAAATTGGATGCTTAAATTTAATTCATATGTCCACATCATTCATTCATAGCACCAATTTTCTCAAACCCAACATCTAAAAAGAAGTTATTAAATAGGTCCCACAAATAATTTTATATCATTACATTTTAACAAAATTTAATTATTTTTTTAATA
TAAGAC CA  CAC    TAGCATTC                                                                                                                                                          
|||||| ||  |||    ||||||||                                                                                                                                                          T
ATTCTG GT  GTG    CTAAAGAT                                                                                                                                                          
      A  TA   ----        TTTCAATTGTCTTTAGAATACCACCCACAAAGTGGATAAATCGTGATGTAATTTATCCGTGGGGTAACACCTCATATTATGTACCCACTGATACCTTTACCACCTATACCTTCGTAGTAGAGAGAGAAGTAAAAAGTACCCAGTGTAAATTATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3