SE2020060

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5262
  • Medicago truncatula
  • SE2020060
  • Mutator
  • M26
  • MtChr4:6809808-6810075
  • TTATGAGAA
  • TTCTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTATGAGAAA      TGTAGGA              C                             AC                   ATGAATGGTGTTGGTGGTGAATGGTGATGGAAGATCACAAACTAATGG
          TTCTTG       ACGAACCTAGCCTA CATCCTTACAAACAACAAATTAAAACATG  ACGTCGTTGTTTTTCCACC                                                
          ||||||       |||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||                                                T
          AAGAAT       TGCTTGGATTGGAT GTAGGAATGTTTGTTGTTTAATTTTGTAC  TGCAGCAACAAAAGAAAAT                                                
   CAAGTAG      --TAAGA              A                             GA                   TTTATTAATATTTTTTTATTTAGTTGATCAGGAAAGAGAGAGAGGTGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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