SE2020061

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5263
  • Medicago truncatula
  • SE2020061
  • Mutator
  • M27
  • MtChr3:19919531-19919721
  • AATAAATAA
  • GGGTCTTGTTAACGAGTGCTCCCGGGACACTCTTTAAGGATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AATAAATAA   TCT              C        C     AA       AAGAGAATA     TTT ATAAAAAGTCAAATATTTTGATTTTCG
         GGG   TGTTAACGAGTGCT CCGGGACA TCTTT  GGATTTT         AATTA   C                           
         |||   |||||||||||||| |||||||| |||||  |||||||         |||||   |                            
         CCC   ACAATTGCTCACGA GGCTCTGT AGAAA  TCTGAAA         TTGAA   A                           
AATAAATAA   TTT              A        A     -C       -ATATACCA     --- AAAACTTTTAAATACATTAGTTACGTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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