SE2020062

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5264
  • Medicago truncatula
  • SE2020062
  • Mutator
  • M18
  • MtChr6:1796871-1797065
  • ATATTTAAT
  • TATTTAATCGAGGAACGGTAGCAACACTC

Secondary structure and sequence

TSD    TIR
5'



3' 
A   TT   C   GA C G           ATTTTTCAACATTT       C       C        ----AA  AATTCAATGTATGTCCCACCACTTTGTTTA
 TAT  AAT GAG  A G TAGCAACACTC              TTTTTAA ATTCACT TTTTATTG      TG                              
 |||  ||| |||  | | |||||||||||              ||||||| ||||||| ||||||||      ||                              G
 ATG  TTA CTC  T C ATCGTTGTGAG              AGAGATT TGAGTGA AAAATAAC      TG                              
A   TT   T   AT A G           --------------       A       A        CAAATT  GTAACACCCAGATGTAAAACTTTTAATTTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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