SE2030075

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5277
  • Medicago truncatula
  • SE2030075
  • hAT
  • Hat9
  • MtChr5:41570424-41570595
  • CATATTAG
  • GCTATGAAGCACGGATAC

Secondary structure and sequence

TSD    TIR
5'



3' 
CATATTA       A          GAACAAGAAAAGAC    CGACACAATTAAAAAATTTAGAAAATCACATAATTCAATGTAATTATAT
       GCTATGA GCACGGATAC              ACGC                                                 
       ||||||| ||||||||||              ||||                                                 G
       CGATACT CGTGCCTGTG              GGAG                                                 
GATTATA       A          -------------A    CCTATTCCGCACAGATGCACTGTCTGTACACAGCACAGGCTGTGGCTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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