SE2010079

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5281
  • Medicago truncatula
  • SE2010079
  • Tc1/Mariner
  • St1
  • MtChr1:28980352-28980500
  • TA
  • TACTCATTCCGTTTCAAAATATAAGCAAAATTCACTTTTTAGATTCATTCATTTAATGATGTATGTGGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
     A      T                   C         A                          - TATA
TACTC TTCCGT TCAAAATATAAGCAAAATT ACTTTTTAG TTCATTCATTTAATGATGTATGTGGT C    
||||| |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |     
ATGAG GAGGCA AGTTTTATATTCGTTTTAA TGAAAAATC AAGTAAGTAAATTACTACATACACCA G    
     G      T                   A         C                          A TATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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