SE2010091

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5293
  • Medicago truncatula
  • SE2010091
  • Tc1/Mariner
  • St4
  • MtChr3:25531594-25531744
  • TA
  • TACACCCTCCGGTCACTATTATAAGCAAAAGTTTACATTTTAGATTCATTCATTTAATGATG

Secondary structure and sequence

TSD    TIR
5'



3' 
                  T            T   C       A                  CACA      TTA
TACACCCTCCGGTCACTA TATAAGCAAAAG TTA ATTTTAG TTCATTCATTTAATGATG    TGGTCT   
|||||||||||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||    ||||||   T
ATGTGGGAGGCCAGTGAT ATATTCGTTTTT GAT TAAGATC AAGTAAGTAAATTACTAC    ACCAGA   
                  T            T   A       C                  ATAC      TAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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