SE2020093

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5295
  • Medicago truncatula
  • SE2020093
  • Mutator
  • M39
  • MtChr7:5256240-5256423
  • AAAATAAAA
  • GGCTAAAATATGATTTTGGTCCTTATAAATATGTCTCGTTTTGATTTTA

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAATAAAA            A       -   TA                  A     GTCCTTGTAAATTTTTTTTT           TCCCT     AT
         GGCTAAAATATG TTTTGGT CCT  TAAATATGTCTCGTTTTG TTTTA                    ATTGTTTTTGG     GCAAA  
         |||||||||||| ||||||| |||  |||||||||||||||||| |||||                    |||||||||||     |||||   
         CCGATTTTATAC AAAACCA GGA  GTTTATATGGAGCAAAAC AAAAT                    TGATAAAAGTT     TGTTT  
AAAATAAAA            C       A   -C                  C     ---------------GCCCT           ---TT     TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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