SE2020099

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5301
  • Medicago truncatula
  • SE2020099
  • Mutator
  • M42
  • MtChr5:20335336-20335540
  • TTTATTTAT
  • GGGTAGTGTTAACTTGTGCCCTTAGGGCACATATGTTAAGAAATCCAAAAGAAGAAATA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTATTTAT   T        C     C     G      TAT     GA    C     A       TTCTTTAAAATTT    C   CA     TTAAAAAA
         GGG AGTGTTAA TTGTG CCTTA GGCACA   GTTAA  AATC AAAAG AGAAATA             TGTG ATT  ATTTA        
         ||| |||||||| ||||| ||||| ||||||   |||||  |||| ||||| |||||||             |||| |||  |||||         
         CCC TTACAATT AACAC GGAAT CTGTGT   CAATT  TTAG TTTTC TCTTTAT             ACAC TAA  TAAAT        
TATTTATTT   T        A     A     A      --T     AC    -     A       CAAATAACCTTAC    A   AG     TAGAAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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