SE2010101

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5303
  • Medicago truncatula
  • SE2010101
  • Tc1/Mariner
  • St1
  • MtChr3:40632528-40632678
  • TA
  • TACTCTCTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
          CATT              -    TA       A         A    T        C   -    AA
TACTCTCTTC    TTATTTATGAGAAA AATT  ACTTTTT GATTCATTG GTAA TGATGTAT TTA TCTA  
||||||||||    |||||||||||||| ||||  ||||||| ||||||||| |||| |||||||| ||| ||||  A
ATGAGGGAGG    GATAAATATTTTTT TTAA  TGAAAAA CTAAGTAAC TATT ACTATATA AAT AGAT  
          CCGC              A    -C       A         G    T        -   C    AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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