SE2020109

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5311
  • Medicago truncatula
  • SE2020109
  • Mutator
  • M45
  • MtChr4:21936650-21936853
  • TTAAAATAA
  • TAAGGGAAATGTTAACCAGTGCCTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAAAA      AA         A       -  CTCAGAACCCCGGGGCACTGGTTAAGGAAGCAAATATAGTAACATCACGTTGGAACTTGTGCAATCAAC
      TAAGGG  ATGTTAACC GTGCCTC GG                                                                     
      ||||||  ||||||||| ||||||| ||                                                                      
      ATTCCC  TACAATTGG CACGGAG TC                                                                     
AATAAA      -A         C       A  CCGTAACCAATTTCTTGGGTTTTATTCTTTCAAAATTTAATTTTCATTATGAAAAATTTGAAAATTACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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