SE2020113

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5315
  • Medicago truncatula
  • SE2020113
  • Mutator
  • M45
  • MtChr4:38262546-38262738
  • ATTTTTAAA
  • GGGAAATGCTAACCAGTACCCTTAGGGCAATAGTTAAGGAAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTTTTAAA   AA   C     A   CC       C   A           -----------------    ATAATAATCTCGCATTGAAACTTGTGCATTCA
         GGG  ATG TAACC GTA  CTTAGGG AAT GTTAAGGAAGC                 AGAT                                
         |||  ||| ||||| |||  ||||||| ||| |||||||||||                 ||||                                 
         CCC  TAT ATTGG TAT  GAATCCT TTA CAATTTCTTTG                 TTCA                                
AAATTTTTA   AA   A     C   AA       A   C           ATTTTTTTCTTTCAAAA    ACTTTTATAATTAAAAATTTGAAAACTTTTCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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