SE2020122

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5324
  • Medicago truncatula
  • SE2020122
  • Mutator
  • M2
  • MtChr4:30282390-30282602
  • TATATATTA
  • ATATATTAGAGTAATGATATTTGTACAACCATTTGGTGACAACTTTTGTGACAA

Secondary structure and sequence

TSD    TIR
5'



3' 
 T      T    T                      G         T   T     ---------AC   TTTTTCTCTCTTCTTATTGGTCAAAAACTATGAGAGAGAGAG
  ATATAT AGAG AATGATATTTGTACAACCATTT GTGACAACT TTG GACAA           TTC                                          
  |||||| |||| |||||||||||||||||||||| ||||||||| ||| |||||           |||                                          A
  TATATA TCTC TTACTATAAACATGTTGGTAAA CACTGTTGA AAC TTGTT           TAT                                          
AT      -    T                      A         C   -     GAAAGAGAGAG   GAGTGTAATAGAAGAATGAGAGAGAGAGAGAGAGAGAGAGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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