SE2020124

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5326
  • Medicago truncatula
  • SE2020124
  • Mutator
  • M49
  • MtChr1:10940211-10940415
  • TATATTAAT
  • TATATTAATATGAGAAAACTTAGGTACAATTCCTTAGGTGTTTTTCGTATGGTTCTTAACTAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
                  A      -                            T                      ----AATA     TTTTTGGATATAATAAACTTT
            TATATT ATATGA GAAAACTTAGGTACAATTCCTTAGGTGT TTTCGTATGGTTCTTAACTAAA        CATAT                     
            |||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||        |||||                      
            ATATAA TATACT CTTTTGAATCCATGTTAAGGAATCTACG AAAGCATACCAAGAATTGATTT        CTAAA                     
TAAACTTTCGTT      G      T                            T                      AAGTGGTA     GGAGTTTAGGTATTAAAAGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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