SE2020129

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5331
  • Medicago truncatula
  • SE2020129
  • Mutator
  • M49
  • MtChr3:545256-545444
  • TAAAATTAG
  • AGGAGAAAACTTAGGTACAATTTCTTAGGTGCTTTTCGTATGGTTCTTAACTAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAATT                               C                       TTCAC    A   CCTC  -ATCCAT      C
       AGGAGAAAACTTAGGTACAATTTCTTAGGTG TTTTCGTATGGTTCTTAACTAAA     CATG TTT    GA       AATTTT 
       ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     |||| |||    ||       |||||| T
       TCCTCTTTTGAATCCATGTTAAGGAATCCAC AAAAGCATACCAAGAATTGATTT     GTAT AAA    CT       TTGAAA 
TTAAAAT                               A                       -TTAT    A   AAAC  ATATTGT      C
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3