SE2010150

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5352
  • Medicago truncatula
  • SE2010150
  • Tc1/Mariner
  • St13
  • MtChr5:24692667-24692817
  • TA
  • TACTTCTTTCGATCATATTTATAAATAAAATACAACTTTTTAGATTCATTGAATAATTAATGTATTTGGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
    -     C A    A      AA     TAC             C            A     T     ATAT
TACT TCTTT G TCAT TTTATA  TAAAA   AACTTTTTAGATT ATTGAATAATTA TGTAT TGGTC    
|||| ||||| | |||| ||||||  |||||   ||||||||||||| |||||||||||| ||||| |||||    T
ATGA AGAAA C AGTG AAATGT  ATTTT   TTGAAAAATCTAA TAACTTATTAAT ACATA ATCAG    
    G     C -    C      CG     TTA             A            A     T     ATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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