Plant MITE

SE2010157

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_5359
Medicago truncatula
SE2010157
Tc1/Mariner
St15
MtChr2:31932999-31933127
TA
TACTCCATCCGTCCAAAAATATAAACAAAAATTACTCAACAAAAGTTAATGTATTTTGTTCA

Secondary structure and sequence

TSD TIR

5'

3'

     CA  C    A         A       TAC      A     A        T  T  AA
TACTC  TC GTCC AAAATATAA CAAAAAT   TCAACA AAGTT ATGTATTT GT CA  
|||||  || |||| ||||||||| |||||||   |||||| ||||| |||||||| || ||  A
ATGAG  AG CAGG TTTTATATT GTTTTTA   AGTTGT TTCAA TACATAAA TA GT  
     TG  A    G         C       CTC      A     C        C  T  CT

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2010157

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2010157