SE2050165

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5367
  • Medicago truncatula
  • SE2050165
  • PIF/harbinger
  • To9
  • MtChr8:17934017-17934394
  • TAG
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
            --  ---   AAAAAACCAAAAATTGAACTGAACCAAAAAAAAAAAAAAAAAAACTGAATTATTACTAATAGTTCTGAAACTGAACTGAAACAGTACAGTTCGATTCAAAACAGTTCAGTTCAATTCGGTAACTAAAATTCAATTTCATTTGTTTTTTTCAAAGGTATCAATAATAACAGTT
     TAGGGGT  GG   GCA                                                                                                                                                                            
     |||||||  ||   |||                                                                                                                                                                             
     ATAAATC  CA   AAC                                                                                                                                                                            
TTAAT       AA  TAA   GATCGTTAAATTGAGGATTTATTCCTTATACAGAGACTTCTTGTGTAAACTTGATCCCCACCCGTACCAAGTCAAGCCCTACTTTTAACTTGACTTAACAAACGATTTAAATTTTATTGGCTTGACTTAACAAACGTAAAGCTTAACTTGACTTGATAAGGCTTGACTTGAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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