SE2020167

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5369
  • Medicago truncatula
  • SE2020167
  • Mutator
  • M23
  • MtChr4:15480491-15480666
  • CCAAATTCG
  • GGG

Secondary structure and sequence

TSD    TIR
5'



3' 
CCAAATTC   -TAGC        A                              A                          AAAGAG
        GGG     ATTTGGGT ACATAGAGTTGGGTGACATTGGTGACATTG CCAATCACAATGTCACAATGCTTGTG      
        |||     |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||      A
        CCC     TAAACCCA TGTATCTCAACCCACTGTAACCACTGTAAC GGTTAGTGTTACGGTGTTACGAACAC      
ACTTAAAC   TTTTA        C                              C                          AAAGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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